Protein ZmIAA1
ZmIAA1 is a protein in the Aux/IAA family.
Information
Coreg Name: ZmIAA1
Species: Maize
Coreg Family: Aux/IAA
Gene Name(Synonym): IAA2
Uniprot ID: C0HHI7
Subgenome: 1

Protein ZmIAA1

ZmIAA1 is a protein in the Aux/IAA family.

Overview of domains present in v5 transcripts
PF02309
Zm00001eb031190_T003
Zm00001eb031190_T001
Zm00001eb031190_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d030993DAPseq no logo sequence fimo position
Zm00001d030993DAPseq no logo sequence fimo position
Zm00001d030993ChIPseq no logo sequence fimo position
Zm00001d030993PChIPseq no logo sequence fimo position

Interactions where ZmIAA1 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmIAA1 is the target  
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There are 204 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb031190_T003 from maize genome v5

Amino Acid Sequence
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MEVAAAASYSYYGLEAADDDVDNLRATELRLGLPGTEAAEEEEEARQAQKVAAPPPSTPRGKKRDGVSGGIDAAPPAAKA
QVVGWPPVRSYRKSCFQQQQAGAKGKPAAADEGAPGPAGGGVFVKVSMDGAPYLRKVDLGTCGGYRQLREALEAMFLCFS
GPGSGDASGGGGGGSPSDFAVTYEDKDGDLMLVGDVPFSMFIGTCKRLRIMKGSEARLGLGSAKNND

MEVAAAASYSYYGLEAADDDVDNLRATELRLGLPGTEAAEEEEEARQAQKVAAPPPSTPRGKKRDGVSGGIDAAPPAAKA
QVVGWPPVRSYRKSCFQQQQAGAKGKPAAADEGAPGPAGGGVFVKVSMDGAPYLRKVDLGTCGGYRQLREALEAMFLCFS
GPGSGDASGGGGGGSPSDFAVTYEDKDGDLMLVGDVPFSMFIGTCKRLRIMKGSEARLGLGSAKNND

MEVAAAASYSYYGLEAADDDVDNLRATELRLGLPGTEAAEEEEEARQAQKVAAPPPSTPRGKKRDGVSGGIDAAPPAAKA
QVVGWPPVRSYRKSCFQQQQAGAKGKPAAADEGAPGPAGGGVFVKVSMDGAPYLRKVDLGTCGGYRQLREALEAMFLCFS
GPGSGDASGGGGGGSPSDFAVTYEDKDGDLMLVGDVPFSMFIGTCKRLRIMKGSEARLGLGSAKNND

MEVAAAASYSYYGLEAADDDVDNLRATELRLGLPGTEAAEEEEEARQAQKVAAPPPSTPRGKKRDGVSGGIDAAPPAAKA
QVVGWPPVRSYRKSCFQQQQAGAKGKPAAADEGAPGPAGGGVFVKVSMDGAPYLRKVDLGTCGGYRQLREALEAMFLCFS
GPGSGDASGGGGGGSPSDFAVTYEDKDGDLMLVGDVPFSMFIGTCKRLRIMKGSEARLGLGSAKNND

MEVAAAASYSYYGLEAADDDVDNLRATELRLGLPGTEAAEEEEEARQAQKVAAPPPSTPRGKKRDGVSGGIDAAPPAAKA
QVVGWPPVRSYRKSCFQQQQAGAKGKPAAADEGAPGPAGGGVFVKVSMDGAPYLRKVDLGTCGGYRQLREALEAMFLCFS
GPGSGDASGGGGGGSPSDFAVTYEDKDGDLMLVGDVPFSMFIGTCKRLRIMKGSEARLGLGSAKNND

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF02309
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Nucleotide Sequence
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TCACCAGCTACAGCTAGCATAGCAA...

GRMZM2G079957_T01 from maize genome v3


Related TFome: pUT5548

Amino Acid Sequence
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MEVAAAASYSYYGLEAADDDVDNLRATELRLGLPGTEAAEEEEEARQAQKVAAPPPSTPRGKKRDGVSGGIDAAPPAAKA
QVVGWPPVRSYRKSCFQQQQAGAKGKPAAADEGAPGPAGGGVFVKVSMDGAPYLRKVDLGTCGGYRQLREALEAMFLCFS
GPGSGDASGGGGGGSPSDFAVTYEDKDGDLMLVGDVPFRPLWIHTITISLTCGFT

Nucleotide Sequence
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ACACGCACAGCGGCATCACCAGCTA...

GRMZM2G079957_T02 from maize genome v3

Amino Acid Sequence
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MEVAAAASYSYYGLEAADDDVDNLRATELRLGLPGTEAAEEEEEARQAQKVAAPPPSTPRGKKRDGVSGGIDAAPPAAKA
QVVGWPPVRSYRKSCFQQQQAGAKGKPAAADEGAPGPAGGGVFVKVSMDGAPYLRKVDLGTCGGYRQLREALEAMFLCFS
GPGSGDASGGGGGGSPSDFAVTYEDKDGDLMLVGDVPFSMFIGTCKRLRIMKGSEARLGLGSAKNND

Nucleotide Sequence
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ACACGCACAGCGGCATCACCAGCTA...

GRMZM2G079957_T03 from maize genome v3

Amino Acid Sequence
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MDGAPYLRKVDLGTCGGYRQLREALEAMFLCFSGPGSGDASGGGGGGSPSDFAVTYEDKDGDLMLVGDVPFRPLWIHTIT
ISLTCGFT

Nucleotide Sequence
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TCACCAGCTACAGCTAGCATAGCAA...

GRMZM2G079957_T04 from maize genome v3

Amino Acid Sequence
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MDGAPYLRKVDLGTCGGYRQLREALEAMFLCFSGPGSGDASGGGGGGSPSDFAVTYEDKDGDLMLVGDVPFSMFIGTCKR
LRIMKGSEARLGLGSAKNND

Nucleotide Sequence
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TCACCAGCTACAGCTAGCATAGCAA...

Zm00001d030993_T001 from maize genome v4

Amino Acid Sequence
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MEVAAAASYSYYGLEAADDDVDNLRATELRLGLPGTEAAEEEEEARQAQKVAAPPPSTPRGKKRDGVSGGIDAAPPAAKA
QVVGWPPVRSYRKSCFQQQQAGAKGKPAAADEGAPGPAGGGVFVKVSMDGAPYLRKVDLGTCGGYRQLREALEAMFLCFS
GPGSGDASGGGGGGSPSDFAVTYEDKDGDLMLVGDVPFR

Nucleotide Sequence
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CTATCTCCTCCTATCTATAAAACAC...

Zm00001eb031190_T001 from maize genome v5

Amino Acid Sequence
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MEVAAAASYSYYGLEAADDDVDNLRATELRLGLPGTEAAEEEEEARQAQKVAAPPPSTPRGKKRDGVSGGIDAAPPAAKA
QVVGWPPVRSYRKSCFQQQQAGAKGKPAAADEGAPGPAGGGVFVKVSMDGAPYLRKVDLGTCGGYRQLREALEAMFLCFS
GPGSGDASGGGGGGSPSDFAVTYEDKDGDLMLVGDVPFRPLWIHTITISLTSCSSAPASG

Nucleotide Sequence
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GCTCCGCTCTGGCACGTACGTGCGC...

Zm00001eb031190_T002 from maize genome v5

Amino Acid Sequence
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MEVAAAASYSYYGLEAADDDVDNLRATELRLGLPGTEAAEEEEEARQAQKVAAPPPSTPRGKKRDGVSGGIDAAPPAAKA
QVVGWPPVRSYRKSCFQQQQAGAKGKPAAADEGAPGPAGGGVFVKHVHRHLQAAEDHEGV

Nucleotide Sequence
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GCTCCGCTCTGGCACGTACGTGCGC...


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